Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.67■□□□□ 0.1
Nudcd3Q8R1N4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nudcd3Q8R1N4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nudcd3Q8R1N4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Mir1668-201ENSMUST00000184114 107 ntBASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Gm30025-201ENSMUST00000218555 728 ntBASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nudcd3Q8R1N4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Nudcd3Q8R1N4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nudcd3Q8R1N4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nudcd3Q8R1N4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nudcd3Q8R1N4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Nudcd3Q8R1N4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Nudcd3Q8R1N4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nudcd3Q8R1N4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nudcd3Q8R1N4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.63■□□□□ 0.09
Nudcd3Q8R1N4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nudcd3Q8R1N4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nudcd3Q8R1N4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nudcd3Q8R1N4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nudcd3Q8R1N4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nudcd3Q8R1N4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nudcd3Q8R1N4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nudcd3Q8R1N4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nudcd3Q8R1N4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nudcd3Q8R1N4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms