Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shtn1Q8K2Q9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Shtn1Q8K2Q9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Shtn1Q8K2Q9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Shtn1Q8K2Q9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shtn1Q8K2Q9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shtn1Q8K2Q9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shtn1Q8K2Q9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shtn1Q8K2Q9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Mir449b-201ENSMUST00000104833 80 ntBASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Rpph1-201ENSMUST00000175096 319 ntBASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Gm18246-201ENSMUST00000221023 728 ntBASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shtn1Q8K2Q9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Gm19164-201ENSMUST00000210667 640 ntBASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shtn1Q8K2Q9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms