Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Gm44454-201ENSMUST00000198541 138 ntBASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Gm9172-201ENSMUST00000212092 954 ntBASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cchcr1Q8K2I2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cchcr1Q8K2I2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Cchcr1Q8K2I2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
Cchcr1Q8K2I2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cchcr1Q8K2I2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cchcr1Q8K2I2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cchcr1Q8K2I2 Gm13836-201ENSMUST00000121159 501 ntBASIC18.49■□□□□ 0.55
Cchcr1Q8K2I2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Cchcr1Q8K2I2 Gm27742-201ENSMUST00000184667 60 ntBASIC18.49■□□□□ 0.55
Cchcr1Q8K2I2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cchcr1Q8K2I2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cchcr1Q8K2I2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cchcr1Q8K2I2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.49■□□□□ 0.55
Cchcr1Q8K2I2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cchcr1Q8K2I2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cchcr1Q8K2I2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Mir7071-201ENSMUST00000184847 69 ntBASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cchcr1Q8K2I2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gm8825-201ENSMUST00000182565 998 ntBASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gm4518-201ENSMUST00000182638 718 ntBASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gm7367-201ENSMUST00000057611 492 ntBASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cchcr1Q8K2I2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms