Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Hmgcll1Q8JZS7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcll1Q8JZS7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcll1Q8JZS7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcll1Q8JZS7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcll1Q8JZS7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Gm11594-201ENSMUST00000122313 162 ntBASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.06■□□□□ 0.16
Hmgcll1Q8JZS7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcll1Q8JZS7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcll1Q8JZS7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Hmgcll1Q8JZS7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcll1Q8JZS7 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcll1Q8JZS7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Hmgcll1Q8JZS7 Gm8318-201ENSMUST00000182954 872 ntBASIC16.04■□□□□ 0.16
Hmgcll1Q8JZS7 Gm37935-201ENSMUST00000192012 982 ntBASIC16.04■□□□□ 0.16
Hmgcll1Q8JZS7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcll1Q8JZS7 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.04■□□□□ 0.16
Hmgcll1Q8JZS7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcll1Q8JZS7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcll1Q8JZS7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Hmgcll1Q8JZS7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcll1Q8JZS7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcll1Q8JZS7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms