Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.64■□□□□ 0.41
Syne4Q8CII8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Gm2272-201ENSMUST00000194903 582 ntBASIC17.64■□□□□ 0.41
Syne4Q8CII8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Syne4Q8CII8 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.64■□□□□ 0.41
Syne4Q8CII8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.64■□□□□ 0.41
Syne4Q8CII8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne4Q8CII8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Syne4Q8CII8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.63■□□□□ 0.41
Syne4Q8CII8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.63■□□□□ 0.41
Syne4Q8CII8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Gm5779-201ENSMUST00000218467 910 ntBASIC17.63■□□□□ 0.41
Syne4Q8CII8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Syne4Q8CII8 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.63■□□□□ 0.41
Syne4Q8CII8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.63■□□□□ 0.41
Syne4Q8CII8 Gm10154-201ENSMUST00000084445 354 ntBASIC17.63■□□□□ 0.41
Syne4Q8CII8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.63■□□□□ 0.41
Syne4Q8CII8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne4Q8CII8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.62■□□□□ 0.41
Syne4Q8CII8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Syne4Q8CII8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Syne4Q8CII8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Syne4Q8CII8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Syne4Q8CII8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.62■□□□□ 0.41
Syne4Q8CII8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Syne4Q8CII8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syne4Q8CII8 Gm8318-201ENSMUST00000182954 872 ntBASIC17.62■□□□□ 0.41
Syne4Q8CII8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.62■□□□□ 0.41
Syne4Q8CII8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Syne4Q8CII8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.62■□□□□ 0.41
Syne4Q8CII8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syne4Q8CII8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Syne4Q8CII8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syne4Q8CII8 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syne4Q8CII8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Syne4Q8CII8 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Syne4Q8CII8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syne4Q8CII8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.61■□□□□ 0.41
Syne4Q8CII8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Syne4Q8CII8 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.61■□□□□ 0.41
Syne4Q8CII8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne4Q8CII8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Syne4Q8CII8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne4Q8CII8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Syne4Q8CII8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne4Q8CII8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.61■□□□□ 0.41
Syne4Q8CII8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Syne4Q8CII8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.61■□□□□ 0.41
Syne4Q8CII8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne4Q8CII8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne4Q8CII8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne4Q8CII8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne4Q8CII8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Syne4Q8CII8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne4Q8CII8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms