Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Clip4Q8CI96 Gm13312-201ENSMUST00000119631 718 ntBASIC15.78■□□□□ 0.12
Clip4Q8CI96 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Clip4Q8CI96 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.78■□□□□ 0.12
Clip4Q8CI96 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clip4Q8CI96 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clip4Q8CI96 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clip4Q8CI96 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.78■□□□□ 0.12
Clip4Q8CI96 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.78■□□□□ 0.12
Clip4Q8CI96 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clip4Q8CI96 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clip4Q8CI96 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clip4Q8CI96 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.78■□□□□ 0.12
Clip4Q8CI96 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Clip4Q8CI96 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Clip4Q8CI96 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clip4Q8CI96 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Clip4Q8CI96 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Clip4Q8CI96 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Clip4Q8CI96 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clip4Q8CI96 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Clip4Q8CI96 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Clip4Q8CI96 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.77■□□□□ 0.12
Clip4Q8CI96 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.77■□□□□ 0.12
Clip4Q8CI96 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clip4Q8CI96 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.77■□□□□ 0.12
Clip4Q8CI96 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Clip4Q8CI96 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Clip4Q8CI96 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Clip4Q8CI96 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clip4Q8CI96 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clip4Q8CI96 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Clip4Q8CI96 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Clip4Q8CI96 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Clip4Q8CI96 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Clip4Q8CI96 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Clip4Q8CI96 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
Clip4Q8CI96 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Clip4Q8CI96 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Clip4Q8CI96 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.76■□□□□ 0.11
Clip4Q8CI96 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.76■□□□□ 0.11
Clip4Q8CI96 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 Gm27741-201ENSMUST00000185060 237 ntBASIC15.76■□□□□ 0.11
Clip4Q8CI96 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.76■□□□□ 0.11
Clip4Q8CI96 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.76■□□□□ 0.11
Clip4Q8CI96 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.76■□□□□ 0.11
Clip4Q8CI96 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Clip4Q8CI96 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Gm12895-201ENSMUST00000122214 226 ntBASIC15.75■□□□□ 0.11
Clip4Q8CI96 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Asic1-205ENSMUST00000228185 1818 ntBASIC15.75■□□□□ 0.11
Clip4Q8CI96 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clip4Q8CI96 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clip4Q8CI96 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms