Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Gm43433-201ENSMUST00000196573 481 ntBASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Gm43703-201ENSMUST00000200523 763 ntBASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Gm18049-201ENSMUST00000208909 581 ntBASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rp1l1Q8CGM2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Gm15321-201ENSMUST00000121290 288 ntBASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rp1l1Q8CGM2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Gm18766-201ENSMUST00000189811 808 ntBASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Gm29667-201ENSMUST00000190817 490 ntBASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.06■□□□□ 0.16
Rp1l1Q8CGM2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Syt7-204ENSMUST00000223586 1344 ntBASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Gm12859-201ENSMUST00000117834 427 ntBASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.05■□□□□ 0.16
Rp1l1Q8CGM2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Gm14928-201ENSMUST00000120198 477 ntBASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Gm18187-201ENSMUST00000196476 984 ntBASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.04■□□□□ 0.16
Rp1l1Q8CGM2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rp1l1Q8CGM2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.03■□□□□ 0.16
Rp1l1Q8CGM2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.03■□□□□ 0.16
Rp1l1Q8CGM2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rp1l1Q8CGM2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rp1l1Q8CGM2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Rp1l1Q8CGM2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms