Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Gm15467-201ENSMUST00000120582 445 ntBASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Gm27646-201ENSMUST00000183989 110 ntBASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rbm28Q8CGC6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Gm11594-201ENSMUST00000122313 162 ntBASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rbm28Q8CGC6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rbm28Q8CGC6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rbm28Q8CGC6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.44■□□□□ 0.54
Rbm28Q8CGC6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rbm28Q8CGC6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rbm28Q8CGC6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rbm28Q8CGC6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rbm28Q8CGC6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.44■□□□□ 0.54
Rbm28Q8CGC6 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rbm28Q8CGC6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rbm28Q8CGC6 Gm12260-201ENSMUST00000122447 411 ntBASIC18.44■□□□□ 0.54
Rbm28Q8CGC6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.44■□□□□ 0.54
Rbm28Q8CGC6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rbm28Q8CGC6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rbm28Q8CGC6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rbm28Q8CGC6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rbm28Q8CGC6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rbm28Q8CGC6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbm28Q8CGC6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rbm28Q8CGC6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rbm28Q8CGC6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rbm28Q8CGC6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.42■□□□□ 0.54
Rbm28Q8CGC6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rbm28Q8CGC6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Rbm28Q8CGC6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rbm28Q8CGC6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms