Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab43Q8CG50 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.22■□□□□ 0.03
Rab43Q8CG50 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab43Q8CG50 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rab43Q8CG50 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab43Q8CG50 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab43Q8CG50 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab43Q8CG50 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab43Q8CG50 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab43Q8CG50 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab43Q8CG50 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.21■□□□□ 0.03
Rab43Q8CG50 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.21■□□□□ 0.03
Rab43Q8CG50 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.21■□□□□ 0.03
Rab43Q8CG50 Gm44492-201ENSMUST00000197012 141 ntBASIC15.21■□□□□ 0.03
Rab43Q8CG50 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.21■□□□□ 0.03
Rab43Q8CG50 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab43Q8CG50 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rab43Q8CG50 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rab43Q8CG50 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab43Q8CG50 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rab43Q8CG50 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.21■□□□□ 0.03
Rab43Q8CG50 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab43Q8CG50 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rab43Q8CG50 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rab43Q8CG50 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab43Q8CG50 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab43Q8CG50 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rab43Q8CG50 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rab43Q8CG50 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.21■□□□□ 0.02
Rab43Q8CG50 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rab43Q8CG50 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rab43Q8CG50 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rab43Q8CG50 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.2■□□□□ 0.02
Rab43Q8CG50 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Gm13216-201ENSMUST00000117145 591 ntBASIC15.2■□□□□ 0.02
Rab43Q8CG50 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab43Q8CG50 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.2■□□□□ 0.02
Rab43Q8CG50 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Gm10576-201ENSMUST00000191927 825 ntBASIC15.19■□□□□ 0.02
Rab43Q8CG50 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.19■□□□□ 0.02
Rab43Q8CG50 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab43Q8CG50 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rab43Q8CG50 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab43Q8CG50 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rab43Q8CG50 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rab43Q8CG50 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab43Q8CG50 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab43Q8CG50 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.18■□□□□ 0.02
Rab43Q8CG50 Gm14701-201ENSMUST00000117156 348 ntBASIC15.18■□□□□ 0.02
Rab43Q8CG50 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.18■□□□□ 0.02
Rab43Q8CG50 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab43Q8CG50 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab43Q8CG50 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab43Q8CG50 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab43Q8CG50 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms