Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Gm4899-201ENSMUST00000178708 719 ntBASIC19.22■□□□□ 0.67
Smc4Q8CG47 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smc4Q8CG47 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.21■□□□□ 0.67
Smc4Q8CG47 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Gm14722-201ENSMUST00000118943 689 ntBASIC19.21■□□□□ 0.67
Smc4Q8CG47 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.21■□□□□ 0.67
Smc4Q8CG47 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc4Q8CG47 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc4Q8CG47 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Grk6-207ENSMUST00000225925 2769 ntBASIC19.2■□□□□ 0.66
Smc4Q8CG47 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Gm11594-201ENSMUST00000122313 162 ntBASIC19.2■□□□□ 0.66
Smc4Q8CG47 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.2■□□□□ 0.66
Smc4Q8CG47 AC090659.1-201ENSMUST00000224334 768 ntBASIC19.2■□□□□ 0.66
Smc4Q8CG47 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.2■□□□□ 0.66
Smc4Q8CG47 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Smc4Q8CG47 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc4Q8CG47 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Gm14494-201ENSMUST00000118786 435 ntBASIC19.19■□□□□ 0.66
Smc4Q8CG47 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms