Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp20Q8C6M1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp20Q8C6M1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp20Q8C6M1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Usp20Q8C6M1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp20Q8C6M1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Usp20Q8C6M1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Usp20Q8C6M1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp20Q8C6M1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Usp20Q8C6M1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp20Q8C6M1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Gm15358-201ENSMUST00000119249 520 ntBASIC17.25■□□□□ 0.35
Usp20Q8C6M1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp20Q8C6M1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.24■□□□□ 0.35
Usp20Q8C6M1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp20Q8C6M1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp20Q8C6M1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp20Q8C6M1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp20Q8C6M1 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp20Q8C6M1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp20Q8C6M1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms