Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Gm6089-201ENSMUST00000197666 938 ntBASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Gm7461-201ENSMUST00000058918 827 ntBASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc60Q8C4J0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc60Q8C4J0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc60Q8C4J0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ccdc60Q8C4J0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ccdc60Q8C4J0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.89■□□□□ 0.77
Ccdc60Q8C4J0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc60Q8C4J0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc60Q8C4J0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.89■□□□□ 0.77
Ccdc60Q8C4J0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc60Q8C4J0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc60Q8C4J0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc60Q8C4J0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc60Q8C4J0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc60Q8C4J0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc60Q8C4J0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc60Q8C4J0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc60Q8C4J0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc60Q8C4J0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc60Q8C4J0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc60Q8C4J0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc60Q8C4J0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ccdc60Q8C4J0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc60Q8C4J0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc60Q8C4J0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc60Q8C4J0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc60Q8C4J0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc60Q8C4J0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms