Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp44Q8C2S0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.28■□□□□ 0.52
Usp44Q8C2S0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp44Q8C2S0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp44Q8C2S0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.28■□□□□ 0.52
Usp44Q8C2S0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp44Q8C2S0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.28■□□□□ 0.52
Usp44Q8C2S0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.28■□□□□ 0.52
Usp44Q8C2S0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp44Q8C2S0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Usp44Q8C2S0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp44Q8C2S0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.27■□□□□ 0.52
Usp44Q8C2S0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp44Q8C2S0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Usp44Q8C2S0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp44Q8C2S0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp44Q8C2S0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Usp44Q8C2S0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp44Q8C2S0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Usp44Q8C2S0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Usp44Q8C2S0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.27■□□□□ 0.52
Usp44Q8C2S0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp44Q8C2S0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp44Q8C2S0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.27■□□□□ 0.52
Usp44Q8C2S0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp44Q8C2S0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp44Q8C2S0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Usp44Q8C2S0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Usp44Q8C2S0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Usp44Q8C2S0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Usp44Q8C2S0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Usp44Q8C2S0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Usp44Q8C2S0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 BC037039-201ENSMUST00000192003 2205 ntBASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Gm28659-201ENSMUST00000188013 759 ntBASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.26■□□□□ 0.51
Usp44Q8C2S0 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp44Q8C2S0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp44Q8C2S0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Gm8318-201ENSMUST00000182954 872 ntBASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms