Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Gm15358-201ENSMUST00000119249 520 ntBASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Gm5745-201ENSMUST00000183748 313 ntBASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 AC131187.1-201ENSMUST00000224567 809 ntBASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ptcd1Q8C2E4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Gm9682-201ENSMUST00000197505 556 ntBASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Gm43438-201ENSMUST00000198133 379 ntBASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ptcd1Q8C2E4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Gm15427-201ENSMUST00000117288 531 ntBASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Gm45612-201ENSMUST00000211320 160 ntBASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Gm45747-201ENSMUST00000212203 999 ntBASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptcd1Q8C2E4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms