Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Gm12895-201ENSMUST00000122214 226 ntBASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpsf4Q8BQZ5 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Gm34391-201ENSMUST00000203706 907 ntBASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpsf4Q8BQZ5 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Gm13312-201ENSMUST00000119631 718 ntBASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cpsf4Q8BQZ5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Cpsf4Q8BQZ5 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms