Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smco3Q8BQM7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Gm15378-201ENSMUST00000121894 207 ntBASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Gm7791-201ENSMUST00000219066 539 ntBASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smco3Q8BQM7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Trmt13-210ENSMUST00000198454 880 ntBASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Gm20049-201ENSMUST00000219950 730 ntBASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco3Q8BQM7 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Smco3Q8BQM7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms