Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cdhr3Q8BL00 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdhr3Q8BL00 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdhr3Q8BL00 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdhr3Q8BL00 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdhr3Q8BL00 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdhr3Q8BL00 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdhr3Q8BL00 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdhr3Q8BL00 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdhr3Q8BL00 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdhr3Q8BL00 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdhr3Q8BL00 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdhr3Q8BL00 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdhr3Q8BL00 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdhr3Q8BL00 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.67□□□□□ -0.22
Cdhr3Q8BL00 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdhr3Q8BL00 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Gm18032-201ENSMUST00000222541 538 ntBASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Gm9987-201ENSMUST00000069768 567 ntBASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdhr3Q8BL00 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Gm6433-201ENSMUST00000118634 875 ntBASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdhr3Q8BL00 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms