Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrtm4Q80XG9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.21■□□□□ 0.03
Lrrtm4Q80XG9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.21■□□□□ 0.03
Lrrtm4Q80XG9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.21■□□□□ 0.03
Lrrtm4Q80XG9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lrrtm4Q80XG9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lrrtm4Q80XG9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lrrtm4Q80XG9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lrrtm4Q80XG9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lrrtm4Q80XG9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Lrrtm4Q80XG9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lrrtm4Q80XG9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lrrtm4Q80XG9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lrrtm4Q80XG9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lrrtm4Q80XG9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Gm13036-201ENSMUST00000117799 748 ntBASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrtm4Q80XG9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Gm11764-201ENSMUST00000120221 623 ntBASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Gm37153-201ENSMUST00000193637 231 ntBASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Gm6443-201ENSMUST00000203599 874 ntBASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrtm4Q80XG9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Gm5682-201ENSMUST00000173402 505 ntBASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrrtm4Q80XG9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms