Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Gm5312-201ENSMUST00000203728 547 ntBASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Gm13216-201ENSMUST00000117145 591 ntBASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Gm44335-201ENSMUST00000196879 141 ntBASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Gm44297-201ENSMUST00000198304 141 ntBASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Gm44346-201ENSMUST00000198851 141 ntBASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Gm20553-201ENSMUST00000204205 844 ntBASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Thap2-203ENSMUST00000218989 527 ntBASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Gm18246-201ENSMUST00000221023 728 ntBASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Usp6nlQ80XC3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp6nlQ80XC3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Usp6nlQ80XC3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Usp6nlQ80XC3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Usp6nlQ80XC3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp6nlQ80XC3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp6nlQ80XC3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 Gm11745-201ENSMUST00000121669 448 ntBASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.19■□□□□ 0.34
Usp6nlQ80XC3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms