Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Mir3081-201ENSMUST00000175305 84 ntBASIC15.11■□□□□ 0.01
Trim36Q80WG7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Gm45328-201ENSMUST00000210942 917 ntBASIC15.11■□□□□ 0.01
Trim36Q80WG7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim36Q80WG7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.11■□□□□ 0.01
Trim36Q80WG7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.11■□□□□ 0.01
Trim36Q80WG7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim36Q80WG7 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.1■□□□□ 0.01
Trim36Q80WG7 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim36Q80WG7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.1■□□□□ 0.01
Trim36Q80WG7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Olfr129-201ENSMUST00000122318 993 ntBASIC15.1■□□□□ 0.01
Trim36Q80WG7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Gm27357-201ENSMUST00000183754 135 ntBASIC15.1■□□□□ 0.01
Trim36Q80WG7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim36Q80WG7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.1■□□□□ 0.01
Trim36Q80WG7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim36Q80WG7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim36Q80WG7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Gm36967-201ENSMUST00000193814 266 ntBASIC15.09■□□□□ 0.01
Trim36Q80WG7 Gm29707-201ENSMUST00000196325 491 ntBASIC15.09■□□□□ 0.01
Trim36Q80WG7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim36Q80WG7 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim36Q80WG7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trim36Q80WG7 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.08■□□□□ 0.01
Trim36Q80WG7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim36Q80WG7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trim36Q80WG7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim36Q80WG7 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim36Q80WG7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim36Q80WG7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim36Q80WG7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim36Q80WG7 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim36Q80WG7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms