Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 AA543401-201ENSMUST00000164248 1269 ntBASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38bQ80SY5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38bQ80SY5 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38bQ80SY5 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Prpf38bQ80SY5 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms