Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pif1Q80SX8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.4□□□□□ -0.1
Pif1Q80SX8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.4□□□□□ -0.1
Pif1Q80SX8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.4□□□□□ -0.1
Pif1Q80SX8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.4□□□□□ -0.1
Pif1Q80SX8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.4□□□□□ -0.1
Pif1Q80SX8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.4□□□□□ -0.1
Pif1Q80SX8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pif1Q80SX8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Pif1Q80SX8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.39□□□□□ -0.11
Pif1Q80SX8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.39□□□□□ -0.11
Pif1Q80SX8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.39□□□□□ -0.11
Pif1Q80SX8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Pif1Q80SX8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Gm17271-201ENSMUST00000165535 355 ntBASIC14.38□□□□□ -0.11
Pif1Q80SX8 Gm4899-201ENSMUST00000178708 719 ntBASIC14.38□□□□□ -0.11
Pif1Q80SX8 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.38□□□□□ -0.11
Pif1Q80SX8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pif1Q80SX8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.38□□□□□ -0.11
Pif1Q80SX8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms