Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdp1Q7TSG2 Gm10566-201ENSMUST00000086739 996 ntBASIC17.1■□□□□ 0.33
Ctdp1Q7TSG2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdp1Q7TSG2 BC037039-201ENSMUST00000192003 2205 ntBASIC17.1■□□□□ 0.33
Ctdp1Q7TSG2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdp1Q7TSG2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdp1Q7TSG2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdp1Q7TSG2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdp1Q7TSG2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.1■□□□□ 0.33
Ctdp1Q7TSG2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ctdp1Q7TSG2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdp1Q7TSG2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.1■□□□□ 0.33
Ctdp1Q7TSG2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdp1Q7TSG2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdp1Q7TSG2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Gm29707-201ENSMUST00000196325 491 ntBASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ctdp1Q7TSG2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctdp1Q7TSG2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctdp1Q7TSG2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctdp1Q7TSG2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctdp1Q7TSG2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctdp1Q7TSG2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctdp1Q7TSG2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ctdp1Q7TSG2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Ctdp1Q7TSG2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ctdp1Q7TSG2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ctdp1Q7TSG2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ctdp1Q7TSG2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Ctdp1Q7TSG2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ctdp1Q7TSG2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ctdp1Q7TSG2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ctdp1Q7TSG2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ctdp1Q7TSG2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ctdp1Q7TSG2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ctdp1Q7TSG2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ctdp1Q7TSG2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.08■□□□□ 0.32
Ctdp1Q7TSG2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ctdp1Q7TSG2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ctdp1Q7TSG2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ctdp1Q7TSG2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Ctdp1Q7TSG2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdp1Q7TSG2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdp1Q7TSG2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ctdp1Q7TSG2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdp1Q7TSG2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdp1Q7TSG2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdp1Q7TSG2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdp1Q7TSG2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.07■□□□□ 0.32
Ctdp1Q7TSG2 Gm9013-201ENSMUST00000132939 882 ntBASIC17.07■□□□□ 0.32
Ctdp1Q7TSG2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdp1Q7TSG2 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.07■□□□□ 0.32
Ctdp1Q7TSG2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Ctdp1Q7TSG2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ctdp1Q7TSG2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ctdp1Q7TSG2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms