Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Rfx4Q7TNK1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Rfx4Q7TNK1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfx4Q7TNK1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.05■□□□□ -0
Rfx4Q7TNK1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.05■□□□□ -0
Rfx4Q7TNK1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.04■□□□□ -0
Rfx4Q7TNK1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx4Q7TNK1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Gm10653-202ENSMUST00000139570 835 ntBASIC15.03■□□□□ -0
Rfx4Q7TNK1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rfx4Q7TNK1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.03■□□□□ -0
Rfx4Q7TNK1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx4Q7TNK1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Rfx4Q7TNK1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx4Q7TNK1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx4Q7TNK1 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.02■□□□□ -0
Rfx4Q7TNK1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Rfx4Q7TNK1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx4Q7TNK1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx4Q7TNK1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx4Q7TNK1 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.02■□□□□ -0
Rfx4Q7TNK1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx4Q7TNK1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rfx4Q7TNK1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx4Q7TNK1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rfx4Q7TNK1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx4Q7TNK1 Gm13474-201ENSMUST00000122466 815 ntBASIC15.02■□□□□ -0
Rfx4Q7TNK1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.02■□□□□ -0
Rfx4Q7TNK1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Rfx4Q7TNK1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rfx4Q7TNK1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx4Q7TNK1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx4Q7TNK1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rfx4Q7TNK1 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfx4Q7TNK1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Rfx4Q7TNK1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfx4Q7TNK1 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfx4Q7TNK1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfx4Q7TNK1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Rfx4Q7TNK1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Rfx4Q7TNK1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms