Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Gm9013-201ENSMUST00000132939 882 ntBASIC13.16□□□□□ -0.3
Smim12Q78RX3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Gm18032-201ENSMUST00000222541 538 ntBASIC13.16□□□□□ -0.3
Smim12Q78RX3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smim12Q78RX3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.15□□□□□ -0.3
Smim12Q78RX3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.15□□□□□ -0.3
Smim12Q78RX3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.15□□□□□ -0.3
Smim12Q78RX3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim12Q78RX3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.14□□□□□ -0.31
Smim12Q78RX3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Gm7367-201ENSMUST00000057611 492 ntBASIC13.14□□□□□ -0.31
Smim12Q78RX3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim12Q78RX3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms