Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Gm26308-201ENSMUST00000157768 69 ntBASIC16.21■□□□□ 0.19
Cspg5Q71M36 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.21■□□□□ 0.19
Cspg5Q71M36 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cspg5Q71M36 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Cspg5Q71M36 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cspg5Q71M36 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cspg5Q71M36 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cspg5Q71M36 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Gm11780-201ENSMUST00000136880 516 ntBASIC16.2■□□□□ 0.18
Cspg5Q71M36 Gm12497-201ENSMUST00000138778 237 ntBASIC16.2■□□□□ 0.18
Cspg5Q71M36 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg5Q71M36 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.2■□□□□ 0.18
Cspg5Q71M36 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cspg5Q71M36 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Gm7222-201ENSMUST00000117512 906 ntBASIC16.19■□□□□ 0.18
Cspg5Q71M36 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.19■□□□□ 0.18
Cspg5Q71M36 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cspg5Q71M36 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cspg5Q71M36 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cspg5Q71M36 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Cspg5Q71M36 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cspg5Q71M36 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cspg5Q71M36 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.18■□□□□ 0.18
Cspg5Q71M36 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.18■□□□□ 0.18
Cspg5Q71M36 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cspg5Q71M36 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cspg5Q71M36 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cspg5Q71M36 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cspg5Q71M36 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cspg5Q71M36 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
Cspg5Q71M36 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cspg5Q71M36 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cspg5Q71M36 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.17■□□□□ 0.18
Cspg5Q71M36 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cspg5Q71M36 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cspg5Q71M36 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Cspg5Q71M36 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cspg5Q71M36 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cspg5Q71M36 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cspg5Q71M36 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cspg5Q71M36 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Cspg5Q71M36 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cspg5Q71M36 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Cspg5Q71M36 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Cspg5Q71M36 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cspg5Q71M36 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cspg5Q71M36 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms