Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.18■□□□□ 0.02
RfflQ6ZQM0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RfflQ6ZQM0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RfflQ6ZQM0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RfflQ6ZQM0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RfflQ6ZQM0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RfflQ6ZQM0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RfflQ6ZQM0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RfflQ6ZQM0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RfflQ6ZQM0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RfflQ6ZQM0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.16■□□□□ 0.02
RfflQ6ZQM0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.16■□□□□ 0.02
RfflQ6ZQM0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RfflQ6ZQM0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RfflQ6ZQM0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RfflQ6ZQM0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RfflQ6ZQM0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RfflQ6ZQM0 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.16■□□□□ 0.02
RfflQ6ZQM0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RfflQ6ZQM0 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.16■□□□□ 0.02
RfflQ6ZQM0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.16■□□□□ 0.02
RfflQ6ZQM0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RfflQ6ZQM0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.16■□□□□ 0.02
RfflQ6ZQM0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RfflQ6ZQM0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.16■□□□□ 0.02
RfflQ6ZQM0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Gm5643-201ENSMUST00000117081 966 ntBASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RfflQ6ZQM0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RfflQ6ZQM0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RfflQ6ZQM0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.14■□□□□ 0.01
RfflQ6ZQM0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RfflQ6ZQM0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RfflQ6ZQM0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RfflQ6ZQM0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RfflQ6ZQM0 Gm11336-201ENSMUST00000118168 334 ntBASIC15.14■□□□□ 0.01
RfflQ6ZQM0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RfflQ6ZQM0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RfflQ6ZQM0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RfflQ6ZQM0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RfflQ6ZQM0 Gm37856-201ENSMUST00000191634 999 ntBASIC15.14■□□□□ 0.01
RfflQ6ZQM0 Timm23-208ENSMUST00000226683 750 ntBASIC15.14■□□□□ 0.01
RfflQ6ZQM0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RfflQ6ZQM0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RfflQ6ZQM0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.14■□□□□ 0.01
RfflQ6ZQM0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RfflQ6ZQM0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RfflQ6ZQM0 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms