Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 Gm26308-201ENSMUST00000157768 69 ntBASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1l1Q6T3U4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1l1Q6T3U4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Npc1l1Q6T3U4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1l1Q6T3U4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1l1Q6T3U4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1l1Q6T3U4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1l1Q6T3U4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1l1Q6T3U4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.68■□□□□ 0.58
Npc1l1Q6T3U4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1l1Q6T3U4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Npc1l1Q6T3U4 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1l1Q6T3U4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1l1Q6T3U4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1l1Q6T3U4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1l1Q6T3U4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1l1Q6T3U4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1l1Q6T3U4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1l1Q6T3U4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Gm14722-201ENSMUST00000118943 689 ntBASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1l1Q6T3U4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1l1Q6T3U4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Mir8117-201ENSMUST00000184773 107 ntBASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.65■□□□□ 0.58
Npc1l1Q6T3U4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms