Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.14□□□□□ -0.31
Rif1Q6PR54 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.13□□□□□ -0.31
Rif1Q6PR54 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.13□□□□□ -0.31
Rif1Q6PR54 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.13□□□□□ -0.31
Rif1Q6PR54 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.13□□□□□ -0.31
Rif1Q6PR54 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.13□□□□□ -0.31
Rif1Q6PR54 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.13□□□□□ -0.31
Rif1Q6PR54 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.13□□□□□ -0.31
Rif1Q6PR54 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Gm13226-201ENSMUST00000117838 404 ntBASIC13.12□□□□□ -0.31
Rif1Q6PR54 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.12□□□□□ -0.31
Rif1Q6PR54 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.12□□□□□ -0.31
Rif1Q6PR54 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rif1Q6PR54 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.11□□□□□ -0.31
Rif1Q6PR54 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Gm43703-201ENSMUST00000200523 763 ntBASIC13.11□□□□□ -0.31
Rif1Q6PR54 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.11□□□□□ -0.31
Rif1Q6PR54 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rif1Q6PR54 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms