Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim45Q6PFY8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Trim45Q6PFY8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim45Q6PFY8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim45Q6PFY8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim45Q6PFY8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim45Q6PFY8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trim45Q6PFY8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim45Q6PFY8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trim45Q6PFY8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Trim45Q6PFY8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trim45Q6PFY8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim45Q6PFY8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim45Q6PFY8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Gm36967-201ENSMUST00000193814 266 ntBASIC14.83□□□□□ -0.04
Trim45Q6PFY8 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.83□□□□□ -0.04
Trim45Q6PFY8 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Trim45Q6PFY8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Gm15165-201ENSMUST00000118140 502 ntBASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Gm28659-201ENSMUST00000188013 759 ntBASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Gm7461-201ENSMUST00000058918 827 ntBASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim45Q6PFY8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Gm12644-201ENSMUST00000119935 606 ntBASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim45Q6PFY8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms