Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Snrnp40Q6PE01 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Snrnp40Q6PE01 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.71□□□□□ -0.22
Snrnp40Q6PE01 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Gm16198-201ENSMUST00000118766 670 ntBASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Gm24158-201ENSMUST00000175263 71 ntBASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Gm10253-201ENSMUST00000194270 940 ntBASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Gm18057-201ENSMUST00000208220 503 ntBASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Snrnp40Q6PE01 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm22065-201ENSMUST00000103753 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm22066-201ENSMUST00000103761 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm24932-201ENSMUST00000103763 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm24115-201ENSMUST00000103799 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm22190-201ENSMUST00000103827 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm22191-201ENSMUST00000103831 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm24721-201ENSMUST00000103849 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm28018-201ENSMUST00000103869 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm26399-201ENSMUST00000103937 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm25349-201ENSMUST00000177728 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm23616-201ENSMUST00000177797 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm25871-201ENSMUST00000177816 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm24752-201ENSMUST00000178240 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm24496-201ENSMUST00000178287 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm25649-201ENSMUST00000178476 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm25548-201ENSMUST00000178681 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm23147-201ENSMUST00000178841 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm26095-201ENSMUST00000179270 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm22171-201ENSMUST00000179283 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm23936-201ENSMUST00000179354 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm22619-201ENSMUST00000179516 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm25255-201ENSMUST00000179579 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm24755-201ENSMUST00000179691 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm26506-201ENSMUST00000179692 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm25086-201ENSMUST00000179931 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm23243-201ENSMUST00000180047 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm24659-201ENSMUST00000180212 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm24169-201ENSMUST00000180244 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm23689-201ENSMUST00000180354 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm27359-201ENSMUST00000184153 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm27785-201ENSMUST00000184268 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm27466-201ENSMUST00000184396 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm27703-201ENSMUST00000184836 110 ntBASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Snrnp40Q6PE01 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms