Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Gm13015-201ENSMUST00000118674 204 ntBASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Gm18057-201ENSMUST00000208220 503 ntBASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 CT009510.1-201ENSMUST00000227972 270 ntBASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Gm8597-201ENSMUST00000191525 1109 ntBASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 AC126408.1-201ENSMUST00000225184 523 ntBASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd4Q6PDQ2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chd4Q6PDQ2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
Chd4Q6PDQ2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd4Q6PDQ2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC20.22■□□□□ 0.83
Chd4Q6PDQ2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd4Q6PDQ2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC20.22■□□□□ 0.83
Chd4Q6PDQ2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC20.22■□□□□ 0.83
Chd4Q6PDQ2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd4Q6PDQ2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd4Q6PDQ2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd4Q6PDQ2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Chd4Q6PDQ2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Chd4Q6PDQ2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC20.22■□□□□ 0.83
Chd4Q6PDQ2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd4Q6PDQ2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Chd4Q6PDQ2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd4Q6PDQ2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd4Q6PDQ2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd4Q6PDQ2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd4Q6PDQ2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Chd4Q6PDQ2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd4Q6PDQ2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Chd4Q6PDQ2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd4Q6PDQ2 Gm12428-201ENSMUST00000119844 727 ntBASIC20.21■□□□□ 0.83
Chd4Q6PDQ2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC20.21■□□□□ 0.83
Chd4Q6PDQ2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Chd4Q6PDQ2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd4Q6PDQ2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.21■□□□□ 0.83
Chd4Q6PDQ2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd4Q6PDQ2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Chd4Q6PDQ2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chd4Q6PDQ2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chd4Q6PDQ2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd4Q6PDQ2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chd4Q6PDQ2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC20.2■□□□□ 0.82
Chd4Q6PDQ2 Gm10253-201ENSMUST00000194270 940 ntBASIC20.2■□□□□ 0.82
Chd4Q6PDQ2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC20.2■□□□□ 0.82
Chd4Q6PDQ2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Chd4Q6PDQ2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd4Q6PDQ2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd4Q6PDQ2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chd4Q6PDQ2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Chd4Q6PDQ2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd4Q6PDQ2 Gm8096-201ENSMUST00000209921 1591 ntBASIC20.2■□□□□ 0.82
Chd4Q6PDQ2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Chd4Q6PDQ2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd4Q6PDQ2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd4Q6PDQ2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC20.19■□□□□ 0.82
Chd4Q6PDQ2 Gm23547-201ENSMUST00000158210 271 ntBASIC20.19■□□□□ 0.82
Chd4Q6PDQ2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chd4Q6PDQ2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd4Q6PDQ2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd4Q6PDQ2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Chd4Q6PDQ2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd4Q6PDQ2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Chd4Q6PDQ2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd4Q6PDQ2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chd4Q6PDQ2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd4Q6PDQ2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd4Q6PDQ2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd4Q6PDQ2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd4Q6PDQ2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd4Q6PDQ2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd4Q6PDQ2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd4Q6PDQ2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd4Q6PDQ2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chd4Q6PDQ2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd4Q6PDQ2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd4Q6PDQ2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd4Q6PDQ2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd4Q6PDQ2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms