Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Gm11452-201ENSMUST00000122376 690 ntBASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcc2Q6PDG5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcc2Q6PDG5 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.21■□□□□ 0.51
Smarcc2Q6PDG5 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcc2Q6PDG5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcc2Q6PDG5 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcc2Q6PDG5 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcc2Q6PDG5 Gm7506-201ENSMUST00000207758 815 ntBASIC18.21■□□□□ 0.51
Smarcc2Q6PDG5 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcc2Q6PDG5 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcc2Q6PDG5 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcc2Q6PDG5 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcc2Q6PDG5 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcc2Q6PDG5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcc2Q6PDG5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcc2Q6PDG5 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
Smarcc2Q6PDG5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Smarcc2Q6PDG5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Smarcc2Q6PDG5 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Gm13884-201ENSMUST00000118103 829 ntBASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcc2Q6PDG5 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcc2Q6PDG5 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcc2Q6PDG5 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcc2Q6PDG5 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcc2Q6PDG5 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcc2Q6PDG5 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcc2Q6PDG5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcc2Q6PDG5 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcc2Q6PDG5 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcc2Q6PDG5 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcc2Q6PDG5 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms