Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.55■□□□□ 0.4
Abcf1Q6P542 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abcf1Q6P542 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Abcf1Q6P542 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.54■□□□□ 0.4
Abcf1Q6P542 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Gm7284-201ENSMUST00000131667 944 ntBASIC17.54■□□□□ 0.4
Abcf1Q6P542 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Gm27704-201ENSMUST00000185094 107 ntBASIC17.54■□□□□ 0.4
Abcf1Q6P542 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abcf1Q6P542 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.54■□□□□ 0.4
Abcf1Q6P542 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Gm45328-201ENSMUST00000210942 917 ntBASIC17.53■□□□□ 0.4
Abcf1Q6P542 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Sybu-209ENSMUST00000228639 4113 ntBASIC17.53■□□□□ 0.4
Abcf1Q6P542 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Abcf1Q6P542 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Abcf1Q6P542 BC037039-201ENSMUST00000192003 2205 ntBASIC17.52■□□□□ 0.4
Abcf1Q6P542 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.52■□□□□ 0.4
Abcf1Q6P542 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.52■□□□□ 0.4
Abcf1Q6P542 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.52■□□□□ 0.4
Abcf1Q6P542 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Abcf1Q6P542 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Abcf1Q6P542 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Abcf1Q6P542 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Abcf1Q6P542 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Abcf1Q6P542 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.52■□□□□ 0.4
Abcf1Q6P542 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Abcf1Q6P542 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Abcf1Q6P542 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Abcf1Q6P542 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Abcf1Q6P542 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.52■□□□□ 0.39
Abcf1Q6P542 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Abcf1Q6P542 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Abcf1Q6P542 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Abcf1Q6P542 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.52■□□□□ 0.39
Abcf1Q6P542 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Abcf1Q6P542 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Abcf1Q6P542 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcf1Q6P542 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcf1Q6P542 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abcf1Q6P542 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.5■□□□□ 0.39
Abcf1Q6P542 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms