Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Gm15358-201ENSMUST00000119249 520 ntBASIC16.4■□□□□ 0.22
Scube3Q66PY1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Mir5131-201ENSMUST00000175426 93 ntBASIC16.4■□□□□ 0.22
Scube3Q66PY1 Gm37102-201ENSMUST00000195740 1105 ntBASIC16.4■□□□□ 0.22
Scube3Q66PY1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC16.4■□□□□ 0.22
Scube3Q66PY1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.4■□□□□ 0.22
Scube3Q66PY1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube3Q66PY1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Scube3Q66PY1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scube3Q66PY1 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.39■□□□□ 0.21
Scube3Q66PY1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scube3Q66PY1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scube3Q66PY1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scube3Q66PY1 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC16.39■□□□□ 0.21
Scube3Q66PY1 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scube3Q66PY1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.39■□□□□ 0.21
Scube3Q66PY1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.39■□□□□ 0.21
Scube3Q66PY1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scube3Q66PY1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.39■□□□□ 0.21
Scube3Q66PY1 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scube3Q66PY1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scube3Q66PY1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scube3Q66PY1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scube3Q66PY1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scube3Q66PY1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Scube3Q66PY1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scube3Q66PY1 Prob1-201ENSMUST00000097619 3021 ntBASIC16.38■□□□□ 0.21
Scube3Q66PY1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scube3Q66PY1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scube3Q66PY1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scube3Q66PY1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scube3Q66PY1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scube3Q66PY1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scube3Q66PY1 Gm21156-201ENSMUST00000189693 869 ntBASIC16.38■□□□□ 0.21
Scube3Q66PY1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.38■□□□□ 0.21
Scube3Q66PY1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scube3Q66PY1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scube3Q66PY1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.38■□□□□ 0.21
Scube3Q66PY1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scube3Q66PY1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scube3Q66PY1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scube3Q66PY1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scube3Q66PY1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Scube3Q66PY1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scube3Q66PY1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scube3Q66PY1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scube3Q66PY1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Gm18733-201ENSMUST00000173950 856 ntBASIC16.37■□□□□ 0.21
Scube3Q66PY1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Gm6550-201ENSMUST00000187574 993 ntBASIC16.37■□□□□ 0.21
Scube3Q66PY1 Gm2651-201ENSMUST00000203560 838 ntBASIC16.37■□□□□ 0.21
Scube3Q66PY1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scube3Q66PY1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.36■□□□□ 0.21
Scube3Q66PY1 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scube3Q66PY1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scube3Q66PY1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms