Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six2Q62232 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
Six2Q62232 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Six2Q62232 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Six2Q62232 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six2Q62232 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.64■□□□□ 0.25
Six2Q62232 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Six2Q62232 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six2Q62232 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Six2Q62232 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six2Q62232 Gm8097-201ENSMUST00000117903 829 ntBASIC16.64■□□□□ 0.25
Six2Q62232 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six2Q62232 Gm14722-201ENSMUST00000118943 689 ntBASIC16.64■□□□□ 0.25
Six2Q62232 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Six2Q62232 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Six2Q62232 Gm28033-201ENSMUST00000184224 96 ntBASIC16.64■□□□□ 0.25
Six2Q62232 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.64■□□□□ 0.25
Six2Q62232 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.64■□□□□ 0.25
Six2Q62232 Gm8655-201ENSMUST00000221159 852 ntBASIC16.64■□□□□ 0.25
Six2Q62232 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six2Q62232 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Six2Q62232 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Six2Q62232 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six2Q62232 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.64■□□□□ 0.25
Six2Q62232 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six2Q62232 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six2Q62232 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Six2Q62232 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.64■□□□□ 0.25
Six2Q62232 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Six2Q62232 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six2Q62232 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six2Q62232 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six2Q62232 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six2Q62232 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six2Q62232 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six2Q62232 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six2Q62232 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six2Q62232 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Six2Q62232 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.63■□□□□ 0.25
Six2Q62232 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six2Q62232 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.63■□□□□ 0.25
Six2Q62232 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six2Q62232 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six2Q62232 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six2Q62232 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Six2Q62232 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six2Q62232 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Six2Q62232 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Six2Q62232 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six2Q62232 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Six2Q62232 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Six2Q62232 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six2Q62232 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six2Q62232 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Six2Q62232 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Six2Q62232 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Six2Q62232 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Gm8344-201ENSMUST00000119813 856 ntBASIC16.62■□□□□ 0.25
Six2Q62232 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.62■□□□□ 0.25
Six2Q62232 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Six2Q62232 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Six2Q62232 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Six2Q62232 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Six2Q62232 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Six2Q62232 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six2Q62232 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Six2Q62232 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Six2Q62232 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Six2Q62232 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Six2Q62232 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six2Q62232 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six2Q62232 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.61■□□□□ 0.25
Six2Q62232 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six2Q62232 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.61■□□□□ 0.25
Six2Q62232 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six2Q62232 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms