Protein–RNA interactions for Protein: Q62066

Phox2a, Paired mesoderm homeobox protein 2A, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2aQ62066 Gm18025-201ENSMUST00000221733 862 ntBASIC12.98□□□□□ -0.33
Phox2aQ62066 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Phox2aQ62066 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Phox2aQ62066 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Phox2aQ62066 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Phox2aQ62066 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Phox2aQ62066 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Phox2aQ62066 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.98□□□□□ -0.33
Phox2aQ62066 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Phox2aQ62066 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Phox2aQ62066 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Phox2aQ62066 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Phox2aQ62066 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Phox2aQ62066 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Phox2aQ62066 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.98□□□□□ -0.33
Phox2aQ62066 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Phox2aQ62066 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Phox2aQ62066 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Phox2aQ62066 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Phox2aQ62066 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.97□□□□□ -0.33
Phox2aQ62066 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.97□□□□□ -0.33
Phox2aQ62066 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.97□□□□□ -0.33
Phox2aQ62066 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.97□□□□□ -0.33
Phox2aQ62066 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Phox2aQ62066 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Phox2aQ62066 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Phox2aQ62066 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Phox2aQ62066 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Phox2aQ62066 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Phox2aQ62066 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.96□□□□□ -0.33
Phox2aQ62066 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Phox2aQ62066 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Phox2aQ62066 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Phox2aQ62066 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.96□□□□□ -0.33
Phox2aQ62066 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.96□□□□□ -0.33
Phox2aQ62066 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.96□□□□□ -0.33
Phox2aQ62066 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Phox2aQ62066 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Phox2aQ62066 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Phox2aQ62066 Gm5643-201ENSMUST00000117081 966 ntBASIC12.96□□□□□ -0.33
Phox2aQ62066 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.96□□□□□ -0.33
Phox2aQ62066 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.96□□□□□ -0.33
Phox2aQ62066 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Phox2aQ62066 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.96□□□□□ -0.33
Phox2aQ62066 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Phox2aQ62066 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Phox2aQ62066 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Phox2aQ62066 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Phox2aQ62066 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Phox2aQ62066 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Phox2aQ62066 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Phox2aQ62066 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Phox2aQ62066 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Phox2aQ62066 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Phox2aQ62066 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Phox2aQ62066 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Phox2aQ62066 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Phox2aQ62066 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Phox2aQ62066 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Phox2aQ62066 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.96□□□□□ -0.34
Phox2aQ62066 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Phox2aQ62066 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Phox2aQ62066 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.95□□□□□ -0.34
Phox2aQ62066 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Phox2aQ62066 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Phox2aQ62066 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Phox2aQ62066 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Phox2aQ62066 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Phox2aQ62066 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Phox2aQ62066 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Phox2aQ62066 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Phox2aQ62066 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Phox2aQ62066 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Phox2aQ62066 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Phox2aQ62066 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Phox2aQ62066 Gm10653-202ENSMUST00000139570 835 ntBASIC12.95□□□□□ -0.34
Phox2aQ62066 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms