Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.51□□□□□ -0.57
Foxc1Q61572 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
Foxc1Q61572 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.51□□□□□ -0.57
Foxc1Q61572 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.51□□□□□ -0.57
Foxc1Q61572 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.51□□□□□ -0.57
Foxc1Q61572 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.51□□□□□ -0.57
Foxc1Q61572 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Foxc1Q61572 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Foxc1Q61572 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Foxc1Q61572 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Foxc1Q61572 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Foxc1Q61572 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Foxc1Q61572 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Foxc1Q61572 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Foxc1Q61572 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.5□□□□□ -0.57
Foxc1Q61572 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Gm13899-201ENSMUST00000121519 1255 ntBASIC11.5□□□□□ -0.57
Foxc1Q61572 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.5□□□□□ -0.57
Foxc1Q61572 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.5□□□□□ -0.57
Foxc1Q61572 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.5□□□□□ -0.57
Foxc1Q61572 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.5□□□□□ -0.57
Foxc1Q61572 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.5□□□□□ -0.57
Foxc1Q61572 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.5□□□□□ -0.57
Foxc1Q61572 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.5□□□□□ -0.57
Foxc1Q61572 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC11.5□□□□□ -0.57
Foxc1Q61572 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.5□□□□□ -0.57
Foxc1Q61572 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Foxc1Q61572 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Foxc1Q61572 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.5□□□□□ -0.57
Foxc1Q61572 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Foxc1Q61572 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Foxc1Q61572 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Foxc1Q61572 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Foxc1Q61572 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Gm13884-201ENSMUST00000118103 829 ntBASIC11.49□□□□□ -0.57
Foxc1Q61572 Gm14913-201ENSMUST00000120011 1093 ntBASIC11.49□□□□□ -0.57
Foxc1Q61572 Gm15372-201ENSMUST00000120729 834 ntBASIC11.49□□□□□ -0.57
Foxc1Q61572 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Gm34391-201ENSMUST00000203706 907 ntBASIC11.49□□□□□ -0.57
Foxc1Q61572 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Foxc1Q61572 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Foxc1Q61572 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Foxc1Q61572 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Foxc1Q61572 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms