Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift88Q61371 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
Ift88Q61371 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift88Q61371 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift88Q61371 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ift88Q61371 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift88Q61371 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ift88Q61371 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift88Q61371 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift88Q61371 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ift88Q61371 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Gm9013-201ENSMUST00000132939 882 ntBASIC17.31■□□□□ 0.36
Ift88Q61371 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Ift88Q61371 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ift88Q61371 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.31■□□□□ 0.36
Ift88Q61371 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.31■□□□□ 0.36
Ift88Q61371 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Ift88Q61371 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ift88Q61371 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift88Q61371 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift88Q61371 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift88Q61371 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift88Q61371 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift88Q61371 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift88Q61371 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ift88Q61371 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift88Q61371 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift88Q61371 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.3■□□□□ 0.36
Ift88Q61371 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift88Q61371 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift88Q61371 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift88Q61371 Gm10013-201ENSMUST00000106074 672 ntBASIC17.3■□□□□ 0.36
Ift88Q61371 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ift88Q61371 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.3■□□□□ 0.36
Ift88Q61371 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ift88Q61371 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift88Q61371 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift88Q61371 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ift88Q61371 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Ift88Q61371 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ift88Q61371 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift88Q61371 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ift88Q61371 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Ift88Q61371 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.29■□□□□ 0.36
Ift88Q61371 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ift88Q61371 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ift88Q61371 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ift88Q61371 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ift88Q61371 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ift88Q61371 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.29■□□□□ 0.36
Ift88Q61371 Mir6982-201ENSMUST00000184354 68 ntBASIC17.29■□□□□ 0.36
Ift88Q61371 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift88Q61371 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ift88Q61371 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift88Q61371 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.29■□□□□ 0.36
Ift88Q61371 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ift88Q61371 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift88Q61371 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift88Q61371 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift88Q61371 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ift88Q61371 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ift88Q61371 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ift88Q61371 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.28■□□□□ 0.36
Ift88Q61371 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ift88Q61371 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Ift88Q61371 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ift88Q61371 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ift88Q61371 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ift88Q61371 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ift88Q61371 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ift88Q61371 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ift88Q61371 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Ift88Q61371 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ift88Q61371 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.28■□□□□ 0.36
Ift88Q61371 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.28■□□□□ 0.36
Ift88Q61371 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ift88Q61371 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ift88Q61371 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ift88Q61371 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ift88Q61371 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms