Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Trmt13-210ENSMUST00000198454 880 ntBASIC13.41□□□□□ -0.26
Clns1aQ61189 Gm44450-201ENSMUST00000199528 114 ntBASIC13.41□□□□□ -0.26
Clns1aQ61189 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.41□□□□□ -0.26
Clns1aQ61189 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clns1aQ61189 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clns1aQ61189 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clns1aQ61189 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Clns1aQ61189 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clns1aQ61189 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clns1aQ61189 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clns1aQ61189 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clns1aQ61189 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clns1aQ61189 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clns1aQ61189 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clns1aQ61189 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clns1aQ61189 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.41□□□□□ -0.26
Clns1aQ61189 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clns1aQ61189 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clns1aQ61189 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clns1aQ61189 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clns1aQ61189 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Clns1aQ61189 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.4□□□□□ -0.26
Clns1aQ61189 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Clns1aQ61189 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.4□□□□□ -0.26
Clns1aQ61189 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.4□□□□□ -0.26
Clns1aQ61189 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Clns1aQ61189 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Clns1aQ61189 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Clns1aQ61189 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clns1aQ61189 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Clns1aQ61189 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Clns1aQ61189 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Gm12441-201ENSMUST00000121806 588 ntBASIC13.39□□□□□ -0.27
Clns1aQ61189 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Gm18421-201ENSMUST00000204122 625 ntBASIC13.39□□□□□ -0.27
Clns1aQ61189 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Clns1aQ61189 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clns1aQ61189 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Clns1aQ61189 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Clns1aQ61189 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.38□□□□□ -0.27
Clns1aQ61189 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Clns1aQ61189 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Clns1aQ61189 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.38□□□□□ -0.27
Clns1aQ61189 Gm5643-201ENSMUST00000117081 966 ntBASIC13.38□□□□□ -0.27
Clns1aQ61189 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clns1aQ61189 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Clns1aQ61189 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms