Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf9Q61179 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Irf9Q61179 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf9Q61179 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf9Q61179 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Irf9Q61179 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf9Q61179 Gm8318-201ENSMUST00000182954 872 ntBASIC19.42■□□□□ 0.7
Irf9Q61179 Gm27702-201ENSMUST00000184512 56 ntBASIC19.42■□□□□ 0.7
Irf9Q61179 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
Irf9Q61179 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.42■□□□□ 0.7
Irf9Q61179 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf9Q61179 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf9Q61179 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf9Q61179 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Irf9Q61179 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf9Q61179 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.42■□□□□ 0.7
Irf9Q61179 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf9Q61179 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf9Q61179 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Irf9Q61179 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Irf9Q61179 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf9Q61179 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Irf9Q61179 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf9Q61179 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Irf9Q61179 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf9Q61179 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf9Q61179 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Irf9Q61179 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf9Q61179 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf9Q61179 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.41■□□□□ 0.7
Irf9Q61179 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf9Q61179 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf9Q61179 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Irf9Q61179 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf9Q61179 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf9Q61179 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf9Q61179 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf9Q61179 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf9Q61179 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.4■□□□□ 0.7
Irf9Q61179 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf9Q61179 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Irf9Q61179 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf9Q61179 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Irf9Q61179 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Irf9Q61179 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.4■□□□□ 0.7
Irf9Q61179 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
Irf9Q61179 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Irf9Q61179 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf9Q61179 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.4■□□□□ 0.7
Irf9Q61179 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf9Q61179 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf9Q61179 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf9Q61179 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf9Q61179 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf9Q61179 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Irf9Q61179 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf9Q61179 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf9Q61179 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf9Q61179 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Irf9Q61179 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf9Q61179 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Irf9Q61179 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Irf9Q61179 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Irf9Q61179 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf9Q61179 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf9Q61179 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Irf9Q61179 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Irf9Q61179 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.39■□□□□ 0.69
Irf9Q61179 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf9Q61179 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Irf9Q61179 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Irf9Q61179 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Irf9Q61179 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf9Q61179 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Irf9Q61179 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf9Q61179 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Irf9Q61179 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Irf9Q61179 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Irf9Q61179 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf9Q61179 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.39■□□□□ 0.69
Irf9Q61179 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC19.39■□□□□ 0.69
Irf9Q61179 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.39■□□□□ 0.69
Irf9Q61179 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Irf9Q61179 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf9Q61179 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Irf9Q61179 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Irf9Q61179 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Irf9Q61179 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Irf9Q61179 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Irf9Q61179 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Irf9Q61179 H2af-ps-201ENSMUST00000119066 295 ntBASIC19.38■□□□□ 0.69
Irf9Q61179 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.38■□□□□ 0.69
Irf9Q61179 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Irf9Q61179 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC19.38■□□□□ 0.69
Irf9Q61179 Gm17968-201ENSMUST00000194902 784 ntBASIC19.38■□□□□ 0.69
Irf9Q61179 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Irf9Q61179 AC119177.1-201ENSMUST00000227647 1332 ntBASIC19.38■□□□□ 0.69
Irf9Q61179 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Irf9Q61179 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Irf9Q61179 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms