Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ptch1Q61115 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ptch1Q61115 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC22.32■■□□□ 1.16
Ptch1Q61115 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ptch1Q61115 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ptch1Q61115 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ptch1Q61115 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ptch1Q61115 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC22.32■■□□□ 1.16
Ptch1Q61115 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Ptch1Q61115 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ptch1Q61115 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ptch1Q61115 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ptch1Q61115 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ptch1Q61115 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptch1Q61115 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptch1Q61115 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC22.31■■□□□ 1.16
Ptch1Q61115 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Ptch1Q61115 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Ptch1Q61115 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptch1Q61115 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ptch1Q61115 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptch1Q61115 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptch1Q61115 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Ptch1Q61115 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Ptch1Q61115 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Ptch1Q61115 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Ptch1Q61115 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ptch1Q61115 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ptch1Q61115 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ptch1Q61115 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Ptch1Q61115 Gm22189-201ENSMUST00000103822 86 ntBASIC22.3■■□□□ 1.16
Ptch1Q61115 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Ptch1Q61115 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC22.3■■□□□ 1.16
Ptch1Q61115 Ighv8-7-201ENSMUST00000194349 297 ntBASIC22.3■■□□□ 1.16
Ptch1Q61115 Gm8515-201ENSMUST00000194852 576 ntBASIC22.3■■□□□ 1.16
Ptch1Q61115 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ptch1Q61115 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC22.3■■□□□ 1.16
Ptch1Q61115 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC22.3■■□□□ 1.16
Ptch1Q61115 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ptch1Q61115 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC22.3■■□□□ 1.16
Ptch1Q61115 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC22.3■■□□□ 1.16
Ptch1Q61115 Gm13233-201ENSMUST00000118760 1443 ntBASIC22.3■■□□□ 1.16
Ptch1Q61115 Gm13244-201ENSMUST00000118855 1446 ntBASIC22.3■■□□□ 1.16
Ptch1Q61115 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptch1Q61115 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptch1Q61115 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptch1Q61115 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptch1Q61115 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptch1Q61115 Gm14042-201ENSMUST00000120139 833 ntBASIC22.29■■□□□ 1.16
Ptch1Q61115 Gm8597-201ENSMUST00000191525 1109 ntBASIC22.29■■□□□ 1.16
Ptch1Q61115 Gm43338-201ENSMUST00000198617 2223 ntBASIC22.29■■□□□ 1.16
Ptch1Q61115 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptch1Q61115 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Ptch1Q61115 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Ptch1Q61115 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC22.28■■□□□ 1.16
Ptch1Q61115 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ptch1Q61115 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ptch1Q61115 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ptch1Q61115 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Ptch1Q61115 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ptch1Q61115 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ptch1Q61115 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC22.28■■□□□ 1.16
Ptch1Q61115 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ptch1Q61115 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ptch1Q61115 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ptch1Q61115 Gm6539-201ENSMUST00000119157 1064 ntBASIC22.27■■□□□ 1.16
Ptch1Q61115 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Ptch1Q61115 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC22.27■■□□□ 1.16
Ptch1Q61115 Gm45384-201ENSMUST00000210451 277 ntBASIC22.27■■□□□ 1.16
Ptch1Q61115 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ptch1Q61115 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ptch1Q61115 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Ptch1Q61115 AC115863.1-201ENSMUST00000214815 1813 ntBASIC22.27■■□□□ 1.15
Ptch1Q61115 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptch1Q61115 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptch1Q61115 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptch1Q61115 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptch1Q61115 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC22.26■■□□□ 1.15
Ptch1Q61115 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC22.26■■□□□ 1.15
Ptch1Q61115 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ptch1Q61115 Gm45293-201ENSMUST00000209754 1812 ntBASIC22.26■■□□□ 1.15
Ptch1Q61115 Asic1-205ENSMUST00000228185 1818 ntBASIC22.26■■□□□ 1.15
Ptch1Q61115 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Ptch1Q61115 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptch1Q61115 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptch1Q61115 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Ptch1Q61115 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptch1Q61115 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptch1Q61115 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch1Q61115 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch1Q61115 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch1Q61115 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch1Q61115 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch1Q61115 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch1Q61115 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch1Q61115 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch1Q61115 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch1Q61115 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch1Q61115 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC22.25■■□□□ 1.15
Ptch1Q61115 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms