Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col12a1Q60847 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Col12a1Q60847 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col12a1Q60847 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col12a1Q60847 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col12a1Q60847 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col12a1Q60847 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.31■□□□□ 0.04
Col12a1Q60847 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.31■□□□□ 0.04
Col12a1Q60847 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col12a1Q60847 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col12a1Q60847 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.31■□□□□ 0.04
Col12a1Q60847 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.31■□□□□ 0.04
Col12a1Q60847 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col12a1Q60847 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col12a1Q60847 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.31■□□□□ 0.04
Col12a1Q60847 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.3■□□□□ 0.04
Col12a1Q60847 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col12a1Q60847 Gm15824-201ENSMUST00000119516 955 ntBASIC15.3■□□□□ 0.04
Col12a1Q60847 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.3■□□□□ 0.04
Col12a1Q60847 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col12a1Q60847 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col12a1Q60847 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.3■□□□□ 0.04
Col12a1Q60847 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col12a1Q60847 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Col12a1Q60847 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col12a1Q60847 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col12a1Q60847 Gm18049-201ENSMUST00000208909 581 ntBASIC15.3■□□□□ 0.04
Col12a1Q60847 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col12a1Q60847 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.3■□□□□ 0.04
Col12a1Q60847 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.3■□□□□ 0.04
Col12a1Q60847 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col12a1Q60847 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col12a1Q60847 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col12a1Q60847 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col12a1Q60847 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col12a1Q60847 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col12a1Q60847 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col12a1Q60847 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.3■□□□□ 0.04
Col12a1Q60847 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col12a1Q60847 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col12a1Q60847 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col12a1Q60847 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col12a1Q60847 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Col12a1Q60847 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col12a1Q60847 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col12a1Q60847 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.29■□□□□ 0.04
Col12a1Q60847 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col12a1Q60847 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col12a1Q60847 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col12a1Q60847 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.29■□□□□ 0.04
Col12a1Q60847 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col12a1Q60847 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col12a1Q60847 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col12a1Q60847 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.29■□□□□ 0.04
Col12a1Q60847 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Col12a1Q60847 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Col12a1Q60847 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col12a1Q60847 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col12a1Q60847 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col12a1Q60847 Asic1-205ENSMUST00000228185 1818 ntBASIC15.28■□□□□ 0.04
Col12a1Q60847 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col12a1Q60847 Gm43703-201ENSMUST00000200523 763 ntBASIC15.28■□□□□ 0.04
Col12a1Q60847 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col12a1Q60847 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Col12a1Q60847 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col12a1Q60847 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col12a1Q60847 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.28■□□□□ 0.04
Col12a1Q60847 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Col12a1Q60847 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.28■□□□□ 0.04
Col12a1Q60847 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col12a1Q60847 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col12a1Q60847 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col12a1Q60847 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.28■□□□□ 0.04
Col12a1Q60847 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Col12a1Q60847 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col12a1Q60847 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Col12a1Q60847 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col12a1Q60847 Mir3102-201ENSMUST00000175555 104 ntBASIC15.28■□□□□ 0.04
Col12a1Q60847 Gm18827-201ENSMUST00000188341 790 ntBASIC15.28■□□□□ 0.04
Col12a1Q60847 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Col12a1Q60847 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col12a1Q60847 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Col12a1Q60847 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.27■□□□□ 0.04
Col12a1Q60847 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col12a1Q60847 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.27■□□□□ 0.04
Col12a1Q60847 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Col12a1Q60847 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col12a1Q60847 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col12a1Q60847 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col12a1Q60847 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Col12a1Q60847 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col12a1Q60847 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.27■□□□□ 0.04
Col12a1Q60847 Mir1247-201ENSMUST00000116706 82 ntBASIC15.27■□□□□ 0.04
Col12a1Q60847 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.27■□□□□ 0.04
Col12a1Q60847 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.27■□□□□ 0.04
Col12a1Q60847 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.27■□□□□ 0.04
Col12a1Q60847 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col12a1Q60847 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.03
Col12a1Q60847 Mir3547-201ENSMUST00000175461 88 ntBASIC15.27■□□□□ 0.03
Col12a1Q60847 Gm45331-201ENSMUST00000209868 554 ntBASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms