Protein–RNA interactions for Protein: Q5XF89

Atp13a3, Probable cation-transporting ATPase 13A3, mousemouse

Predictions only

Length 1,219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a3Q5XF89 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a3Q5XF89 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a3Q5XF89 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a3Q5XF89 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.62■□□□□ 0.41
Atp13a3Q5XF89 Gm14722-201ENSMUST00000118943 689 ntBASIC17.62■□□□□ 0.41
Atp13a3Q5XF89 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a3Q5XF89 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.62■□□□□ 0.41
Atp13a3Q5XF89 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.62■□□□□ 0.41
Atp13a3Q5XF89 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a3Q5XF89 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.62■□□□□ 0.41
Atp13a3Q5XF89 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Atp13a3Q5XF89 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a3Q5XF89 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a3Q5XF89 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a3Q5XF89 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a3Q5XF89 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Chchd1-203ENSMUST00000224633 557 ntBASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a3Q5XF89 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Atp13a3Q5XF89 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Gm26308-201ENSMUST00000157768 69 ntBASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Atp13a3Q5XF89 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atp13a3Q5XF89 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Atp13a3Q5XF89 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.58■□□□□ 0.41
Atp13a3Q5XF89 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Atp13a3Q5XF89 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms