Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Shroom1Q5SX79 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Gm8344-201ENSMUST00000119813 856 ntBASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Gm6736-201ENSMUST00000166583 948 ntBASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Gm5682-201ENSMUST00000173402 505 ntBASIC16.61■□□□□ 0.25
Shroom1Q5SX79 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shroom1Q5SX79 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shroom1Q5SX79 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms