Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8d-1Q5R1H8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Gm18101-201ENSMUST00000215769 548 ntBASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav8d-1Q5R1H8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Gm10013-201ENSMUST00000106074 672 ntBASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 BC037039-201ENSMUST00000192003 2205 ntBASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.84□□□□□ -0.35
Trav8d-1Q5R1H8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav8d-1Q5R1H8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav8d-1Q5R1H8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav8d-1Q5R1H8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.35
Trav8d-1Q5R1H8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav8d-1Q5R1H8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Gm27389-201ENSMUST00000183622 195 ntBASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms