Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Gm25016-201ENSMUST00000158399 131 ntBASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Gm10231-201ENSMUST00000181584 441 ntBASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Gm10175-202ENSMUST00000208752 441 ntBASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-3Q5R1E6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Sybu-209ENSMUST00000228639 4113 ntBASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.54□□□□□ -0.4
Trav6-3Q5R1E6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-3Q5R1E6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms