Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm13474-201ENSMUST00000122466 815 ntBASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms