Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Urb1Q571H0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Urb1Q571H0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Urb1Q571H0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Urb1Q571H0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Urb1Q571H0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.38□□□□□ -0.11
Urb1Q571H0 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.38□□□□□ -0.11
Urb1Q571H0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Urb1Q571H0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Urb1Q571H0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Urb1Q571H0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.37□□□□□ -0.11
Urb1Q571H0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.37□□□□□ -0.11
Urb1Q571H0 Gm43474-201ENSMUST00000196415 774 ntBASIC14.37□□□□□ -0.11
Urb1Q571H0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Gm7787-201ENSMUST00000216858 688 ntBASIC14.37□□□□□ -0.11
Urb1Q571H0 Gm18622-201ENSMUST00000219361 595 ntBASIC14.37□□□□□ -0.11
Urb1Q571H0 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.37□□□□□ -0.11
Urb1Q571H0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Urb1Q571H0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Urb1Q571H0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Urb1Q571H0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.36□□□□□ -0.11
Urb1Q571H0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Urb1Q571H0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Urb1Q571H0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Urb1Q571H0 Gm27301-201ENSMUST00000184012 127 ntBASIC14.36□□□□□ -0.11
Urb1Q571H0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.36□□□□□ -0.11
Urb1Q571H0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Urb1Q571H0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Urb1Q571H0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Urb1Q571H0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Urb1Q571H0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Urb1Q571H0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Urb1Q571H0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Urb1Q571H0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Urb1Q571H0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Urb1Q571H0 Mir449b-201ENSMUST00000104833 80 ntBASIC14.36□□□□□ -0.11
Urb1Q571H0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Urb1Q571H0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Urb1Q571H0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.36□□□□□ -0.11
Urb1Q571H0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.36□□□□□ -0.11
Urb1Q571H0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Urb1Q571H0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.36□□□□□ -0.11
Urb1Q571H0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Urb1Q571H0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Urb1Q571H0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Urb1Q571H0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Urb1Q571H0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Urb1Q571H0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Urb1Q571H0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Urb1Q571H0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Urb1Q571H0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Urb1Q571H0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.35□□□□□ -0.11
Urb1Q571H0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Urb1Q571H0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Urb1Q571H0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Urb1Q571H0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms