Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Gm7558-201ENSMUST00000193221 1165 ntBASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Gm19220-201ENSMUST00000222682 803 ntBASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Gm43231-201ENSMUST00000202960 2258 ntBASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Gm29127-201ENSMUST00000188304 517 ntBASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Gm12341-201ENSMUST00000119724 503 ntBASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Gm43289-201ENSMUST00000200537 1475 ntBASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Gm13233-201ENSMUST00000118760 1443 ntBASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Gm13244-201ENSMUST00000118855 1446 ntBASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Dctn4-202ENSMUST00000223590 1530 ntBASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Gm27514-201ENSMUST00000183692 110 ntBASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 AC139580.1-202ENSMUST00000223574 928 ntBASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Herc2Q4U2R1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Gm27920-201ENSMUST00000183953 96 ntBASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Gm43822-201ENSMUST00000200285 476 ntBASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Gm18054-201ENSMUST00000207539 555 ntBASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Gm29787-201ENSMUST00000222129 849 ntBASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Herc2Q4U2R1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms